CDS

Accession Number TCMCG006C27233
gbkey CDS
Protein Id XP_022549407.1
Location join(2888672..2888828,2888904..2889281,2889593..2890080,2890170..2890265,2890651..2891322)
Gene LOC106390188
GeneID 106390188
Organism Brassica napus

Protein

Length 596aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022693686.1
Definition D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KEGG_TC -
KEGG_Module M00020        [VIEW IN KEGG]
KEGG_Reaction R01513        [VIEW IN KEGG]
KEGG_rclass RC00031        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K00058        [VIEW IN KEGG]
EC 1.1.1.399        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
1.1.1.95        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00260        [VIEW IN KEGG]
ko00680        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00260        [VIEW IN KEGG]
map00680        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAGCCACCGCATCCTCCGCGATCTCCGTCGCCACCAAGACCCTCAAGAGCTTGTCCCTCTCCACCAGATCGCCTCTCCCATCCGCCGCTTCCGTCGCTTTCCCCACTCCTCGCCGCCGTCTCGTTCTCGTGGCGTGCACAACCGGAGACGGATCCAAGCCGACGATCCTCGTCGCCGAGAAGCTCGGTGAGGCTGGTGTGAAGCTCTTGGAGGATTTCGCGAATGTGGACTGCTCTTACAACCTGACTCCCGAGGAGCTCAACACTAAGATCTCTCTCTGTGACGCGTTGATCGTTAGGAGCGGGACCAAGGTTGGACGTGAGGTGTTCGAGTCTTCTCGCGGTAGGCTCAAGGTTGTTGGACGCGCTGGTGTTGGGATCGACAACGTGGATCTGAGCGCCGCCACGGAGTTTGGATGTCTTGTCGTTAACGCGCCGACGGCGAACACGATCGCCGCCGCTGAGCATGGGATCGCGCTTTTGGCCGGCATGGCCAGGAACGTCGCACAGGCTGATGCATCTGTTAAGGCTGGTGAGTGGAAAAGGAACAAGTATGTAGGTGTTTCACTCGTTGGCAAGACCCTTGCAGTGATGGGATTCGGGAAAGTTGGGACTGAAGTGGCTCGTCGTGCCAAAGGTCTTGGTATGCGTGTCATTGCTCATGATCCCTATGCACCAGCAGACCGTGCACACGCCATTGGTGTTGATCTAGTGAGCTTTGATGAAGCTTTAGCGACTGCTGATTTCATTTCTCTCCACATGCCTCTTACGCCAGCAACATCGAAGATACTCAACGACGAAACGTTTGCCAAGATGAAGAAGGGAGTTCGTATTGTTAACGTTGCACGTGGAGGTGTTATAGACGAAGACGCGTTAGTGAGGGCTCTGGATGCGGGTATTGTTGCTCAGGCTGCTCTTGATGTTTTCACTAAAGAGCCGCCGGCTAAAGATAGTCCTTTAGTGCAGCATGAGAGGGTTACTGTGACACCTCATCTTGGAGCTAGCACAATGGAAGCTCAGGAAGGAGTTGCCATTGAAATTGCTGAAGCTGTTGTTGGAGCTTTGAATGGTGAGCTTGCTGCTACTGCAGTCAATGCACCTATGGTTTCTGCTGAGGTTCTGACCGAGCTGAAACCATATGTGATACTAGCCGAGAAGCTAGGGAGACTAGCGGTGCAGCTAGTGGCTGGAGGAAGCGGCGTGAAGAACGTGAAGGTCTCGTACACGTCAGCACGTGCCACCGACGATCTAGACACAAGACTTCTACGAGCCATGATCACCAAGGGAATCATCGAGCCAATCTCTGACGTGTATGTCAACTTGGTCAACGCAGATTTCACAGCCAAGCAGAGAGGTCTGAGAATCTCAGAGGAACGTGTGCTCTTGGACGGGTCACCAGAGAACCCGTTGGAGACAATAACTGTCCAGCTAGGCAACGTGGAGTCCAAATTTGCGAGCTCGTTGTCTGAGTCAGGAGAGGTGAAAGTGGAAGGAAGGGTTAAAGATGGAGTGCCGCATTTGACGAAGGTTGGATCGTTTGAGGTTGATGTGACTCTTGAAGGTAGTATTATACTGTGCAGGCAGGTGGATCAACCGGGTATGATAGGGACGGTGGGGAGTATACTTGGAGAGTCTAACGTGAATGTGAACTTTATGAGCGTTGGAAGAATCGCACCGAGGAAGCAAGCTATTATGGCGATTGGTGTAGATGATCAGCCGAGTAAGGACACTCTTAAGAAGATTGGGGAGATCCCTGCGGTGGAGGAGTTTGTTTTCCTCAAGGTCTAG
Protein:  
MSATASSAISVATKTLKSLSLSTRSPLPSAASVAFPTPRRRLVLVACTTGDGSKPTILVAEKLGEAGVKLLEDFANVDCSYNLTPEELNTKISLCDALIVRSGTKVGREVFESSRGRLKVVGRAGVGIDNVDLSAATEFGCLVVNAPTANTIAAAEHGIALLAGMARNVAQADASVKAGEWKRNKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMRVIAHDPYAPADRAHAIGVDLVSFDEALATADFISLHMPLTPATSKILNDETFAKMKKGVRIVNVARGGVIDEDALVRALDAGIVAQAALDVFTKEPPAKDSPLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALNGELAATAVNAPMVSAEVLTELKPYVILAEKLGRLAVQLVAGGSGVKNVKVSYTSARATDDLDTRLLRAMITKGIIEPISDVYVNLVNADFTAKQRGLRISEERVLLDGSPENPLETITVQLGNVESKFASSLSESGEVKVEGRVKDGVPHLTKVGSFEVDVTLEGSIILCRQVDQPGMIGTVGSILGESNVNVNFMSVGRIAPRKQAIMAIGVDDQPSKDTLKKIGEIPAVEEFVFLKV